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yueC [2019-01-31 17:54:54]
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yueC [2019-01-31 17:54:54]

membrane protein, part of the type VII protein secretion system YukD-YukC-YukB-YueB-YueC
locus
BSU31850
pI
4.14
mw
16.77 kDa
protein length
151 aa Sequence Blast
gene length
456 bp Sequence Blast
function
export of YukE
product
part of the type VII protein secretion system
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.5|Protein secretion]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    3,266,200 → 3,266,655

    Phenotypes of a mutant

  • loss of secretion of [protein|50D2A03E2D7B5D461540FD157377E0D37F771888|YukE] [Pubmed|24798022]

    • The protein

    [SW|Localization]

  • membrane (according to Swiss-Prot) [Pubmed|23861817]

    • Expression and Regulation

    Operons

    genes
    [gene|50D2A03E2D7B5D461540FD157377E0D37F771888|yukE]-[gene|3CC3E197848E9688413C15CEA7DDCF0A7120A920|yukD]-[gene|3FE4A91C7D0B43C8704391F2F9493852B3AED9B0|yukC]-[gene|6007664F3D979B4D8D4662C7F6E5CF2F489268E3|yukB]-[gene|0A38B2E900532C9950DE6E629F5EB21D64E18B55|yueB]-[gene|DA52C4CD130F32734E01A52F2F395127D2260F61|yueC]-[gene|B258CA26B0EC2310475FCCD67F1F196857FC0004|yueD]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|22383849], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • regulatory mechanism

  • [protein|D343D2096664A972026D911E7A17A35C7B1CD1C9|DegU]: activation, [protein|D343D2096664A972026D911E7A17A35C7B1CD1C9|DegU]-P, [Pubmed|23861817], in [regulon|D343D2096664A972026D911E7A17A35C7B1CD1C9|DegU regulon]

    • regulation

  • expressed in the stationary phase [Pubmed|23861817]
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    Biological materials

    Mutant

  • MGNA-A648 (yueC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/648 NBRP B. subtilis, Japan]
  • BKE31850 (Δ[gene|DA52C4CD130F32734E01A52F2F395127D2260F61|yueC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE31850 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACAAATCATGATCCCCT, downstream forward: _UP4_TAGGCCGCGTGCTTGTGTTG
  • BKK31850 (Δ[gene|DA52C4CD130F32734E01A52F2F395127D2260F61|yueC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK31850 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACAAATCATGATCCCCT, downstream forward: _UP4_TAGGCCGCGTGCTTGTGTTG

    • References

    Reviews

  • 19155186,11973144

    • Original publications

  • 22383849,23861817,24798022